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Aliases : Zm00001e037033
Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 471.0)
Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G03110 | No alias | RNA binding;nucleic acid binding | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008962 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g016202 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016415 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g017897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g024339 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g028830 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054729 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g054731 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055224 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075813 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g075983 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g080529 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106357 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g108369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g128615 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g04093 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04660 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09715 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g04404 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06633 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06699 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04253 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29218 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g62599 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g03276 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07339 | HEN4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G032000.1 | Ceric.17G032000 | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.24G065400.1 | Ceric.24G065400 | not classified & original description: pacid=50629874... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.25G027100.1 | Ceric.25G027100 | not classified & original description: pacid=50594480... | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g707400 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16018 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01662 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g12897 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g24061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01553 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011439001 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021523001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01031037001 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Gb_18830 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38220 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g13470.1 | LOC_Os01g13470 | RNA-binding KH domain-containing protein RCF3... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g23460.1 | LOC_Os06g23460 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18926 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04900 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429211g0010 | No alias | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| MA_6622g0010 | No alias | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g01197 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g10742 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g34355 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03833 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06520 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09995 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15528 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18548 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25271 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g00616 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10935 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13999 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g18424 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30289 | No alias | regulatory protein *(RCF3) of HYL1-phosphorylation &... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g32788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01057 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0026.g009457 | No alias | not classified & original description: CDS=528-2219 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015180 | No alias | E3 ubiquitin ligase *(STUBL1/3) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12504 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g067210.3.1 | Solyc02g067210 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g034200.3.1 | Solyc03g034200 | RNA-binding KH domain-containing protein RCF3... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g082980.3.1 | Solyc03g082980 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g077060.3.1 | Solyc04g077060 | RNA-binding KH domain-containing protein RCF3... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g007810.3.1 | Solyc05g007810 | RNA-binding KH domain-containing protein RCF3... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g048500.3.1 | Solyc08g048500 | KH domain-containing protein At4g18375 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22547 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g36753 | PEP | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010096_P002 | Zm00001e010096 | KH domain-containing protein HEN4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0030014 | CCR4-NOT complex | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| No external refs found! |