Aliases : RAD23D, Zm00001e036768
Description : shuttle protein (RAD23)
Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g058741 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g081473 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g15905 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cre08.g366400 | RAD23B, RAD23 | Ubiquitin receptor RAD23b OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Dac_g18265 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01031048001 | RAD23-3, RAD23C | Ubiquitin receptor RAD23c OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_20110 | RAD23B, RAD23 | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g15360.1 | RAD23-3, RAD23C,... | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g33340.1 | RAD23D, LOC_Os08g33340 | shuttle protein (RAD23) | 0.04 | OrthoFinder output from all 47 species | |
Mp1g26290.1 | RAD23B, RAD23 | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g09383 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g43759 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g64670 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c10_8490V3.1 | RAD23B, RAD23,... | Rad23 UV excision repair protein family | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g63807 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g007120.4.1 | RAD23-3, RAD23C,... | shuttle protein (RAD23) | 0.02 | OrthoFinder output from all 47 species | |
Tin_g19292 | RAD23B, RAD23 | ubiquiTin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g30534 | RAD23B, RAD23 | ubiquiTin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0045048 | protein insertion into ER membrane | IEP | HCCA |
BP | GO:0051205 | protein insertion into membrane | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
No external refs found! |