Aliases : Zm00001e036710
Description : RNA helicase component MTR4/HEN2 of Nuclear Exosome Targeting (NEXT) activation complex
Gene families : OG0000709 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000709_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00200390 | HEN2,... | RNA processing.RNA decay.exosome complex.associated... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00029p00206820 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.exosome complex.associated... | 0.04 | OrthoFinder output from all 47 species | |
AT1G59760 | No alias | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G06990 | HEN2 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.18 | OrthoFinder output from all 47 species | |
AT3G46960 | No alias | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g022453 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Aev_g01540 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07168 | No alias | group-II intron splicing RNA helicase *(ISE2) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g07737 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Als_g01202 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.04 | OrthoFinder output from all 47 species | |
Als_g13022 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g12480 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09338 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g27842 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0027.g023708 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.08G061100.1 | HEN2, Ceric.08G061100 | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.15G051600.1 | Ceric.15G051600 | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.17G002800.1 | Ceric.17G002800 | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020723.108 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.07 | OrthoFinder output from all 47 species | |
Cre02.g117900 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.08 | OrthoFinder output from all 47 species | |
Cre06.g289950 | HEN2 | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
Cre11.g482483 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g10719 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g23858 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g03136 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g12374 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g18967 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.07 | OrthoFinder output from all 47 species | |
Dde_g31250 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g24206 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01037437001 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.09 | OrthoFinder output from all 47 species | |
LOC_Os02g06500.1 | LOC_Os02g06500 | RNA helicase component SKI2 of SUPERKILLER (SKI)... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os11g07500.1 | HEN2, LOC_Os11g07500 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.13 | OrthoFinder output from all 47 species | |
Len_g20478 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Len_g58854 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g02309 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g38626 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.04 | OrthoFinder output from all 47 species | |
MA_10426385g0010 | HEN2 | DExH-box ATP-dependent RNA helicase DExH10... | 0.04 | OrthoFinder output from all 47 species | |
MA_10437094g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH11... | 0.02 | OrthoFinder output from all 47 species | |
MA_33462g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH9 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g03900.1 | HEN2 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Mp6g05580.1 | No alias | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.13 | OrthoFinder output from all 47 species | |
Msp_g19222 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g15707 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g41022 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g07585 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c14_23340V3.1 | Pp3c14_23340 | RNA helicase, ATP-dependent, SK12/DOB1 protein | 0.02 | OrthoFinder output from all 47 species | |
Sam_g10538 | No alias | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g10573 | No alias | RNA helicase component *(MTR4) of TRAMP nucleolar... | 0.02 | OrthoFinder output from all 47 species | |
Smo174598 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
Smo403447 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g103080.3.1 | Solyc01g103080 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.09 | OrthoFinder output from all 47 species | |
Solyc05g047520.4.1 | HEN2, Solyc05g047520 | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g11434 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g29638 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g04756 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008134 | transcription factor binding | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090730 | Las1 complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1902555 | endoribonuclease complex | IEP | HCCA |
CC | GO:1902911 | protein kinase complex | IEP | HCCA |
CC | GO:1905348 | endonuclease complex | IEP | HCCA |
CC | GO:1905354 | exoribonuclease complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
No external refs found! |