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  5. Mp5g09830.1

Mp5g09830.1


Description : pre-mRNA-processing protein (PRP40C)


Gene families : OG_01_0007099 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007099_tree ,
OG_02_0007306 (LandPlants) Phylogenetic Tree(s): OG_02_0007306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g09830.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00102340 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 Archaeplastida
Cre09.g393551 No alias No description available 0.01 Archaeplastida
GSVIVT01010209001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
LOC_Os10g34380.1 No alias pre-mRNA-processing protein (PRP40C) 0.04 Archaeplastida
MA_10430753g0010 No alias pre-mRNA-processing protein (PRP40C) 0.02 Archaeplastida
Pp3c11_2890V3.1 No alias pre-mRNA-processing protein 40C 0.04 Archaeplastida
Pp3c7_20890V3.1 No alias pre-mRNA-processing protein 40C 0.03 Archaeplastida
Smo439648 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 Archaeplastida
Solyc04g008700.3.1 No alias pre-mRNA-processing protein (PRP40C) 0.05 Archaeplastida
Zm00001e012643_P002 No alias pre-mRNA-processing protein (PRP40C) 0.06 Archaeplastida
AMTR_s00029p00102340 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U2-type-intron-specific... 0.02 LandPlants
GSVIVT01010209001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 LandPlants
Gb_26149 No alias pre-mRNA-processing protein (PRP40C) 0.01 LandPlants
LOC_Os10g34380.1 No alias pre-mRNA-processing protein (PRP40C) 0.03 LandPlants
Pp3c11_2890V3.1 No alias pre-mRNA-processing protein 40C 0.03 LandPlants
Pp3c7_20890V3.1 No alias pre-mRNA-processing protein 40C 0.03 LandPlants
Smo439648 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.04 LandPlants
Solyc04g008700.3.1 No alias pre-mRNA-processing protein (PRP40C) 0.04 LandPlants
Zm00001e012643_P002 No alias pre-mRNA-processing protein (PRP40C) 0.05 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001202 WW_dom 333 361
IPR002713 FF_domain 690 735
IPR002713 FF_domain 555 600
IPR002713 FF_domain 619 666
IPR002713 FF_domain 790 841
No external refs found!