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  5. Zm00001e036550_P001

Zm00001e036550_P001 (PBA1, Zm00001e036550)


Aliases : PBA1, Zm00001e036550

Description : component beta type-1 of 26S proteasome


Gene families : OG0003808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036550_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G31300 PBA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.06 OrthoFinder output from all 47 species
Adi_g063247 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aev_g02000 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ala_g10663 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Aob_g25523 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Aop_g00255 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001098.5 PBA1 Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
Cre06.g279000 PBA1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
Cre12.g531100 PBA1 Protein degradation.26S proteasome.20S core... 0.09 OrthoFinder output from all 47 species
Dac_g01306 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
GSVIVT01032253001 PBA1 Protein degradation.26S proteasome.20S core... 0.06 OrthoFinder output from all 47 species
LOC_Os02g53060.1 PBA1, LOC_Os02g53060 component beta type-1 of 26S proteasome 0.08 OrthoFinder output from all 47 species
LOC_Os06g04800.1 PBA1, LOC_Os06g04800 component beta type-1 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Len_g14846 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Len_g14847 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Mp6g09980.1 PBA1 component beta type-1 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Msp_g08337 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Nbi_g00361 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Ore_g05180 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ppi_g41753 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo227897 PBA1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Spa_g09820 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Tin_g26432 PBA1 beta-type-1 component *(PBA) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 21 201
No external refs found!