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  5. Zm00001e036528_P001

Zm00001e036528_P001 (ATSRL1, Zm00001e036528)


Aliases : ATSRL1, Zm00001e036528

Description : Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana (sp|q8rwb1|srl1_arath : 377.0)


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036528_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00011550 ATSRL1,... Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT5G37370 ATSRL1 PRP38 family protein 0.04 OrthoFinder output from all 47 species
Cba_g25073 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G036200.1 ATSRL1, Ceric.07G036200 not classified & original description: pacid=50627179... 0.02 OrthoFinder output from all 47 species
LOC_Os05g08600.2 ATSRL1, LOC_Os05g08600 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g014560.4.1 ATSRL1, Solyc04g014560 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 7 161
No external refs found!