LOC_Os04g13470 (Os04g0212200)


Aliases : Os04g0212200

Description : 35.2 not assigned.unknown Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system. VPS54


Gene families : OG_01_0003754 (Gene family) Phylogenetic Tree(s): OG0003754_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os04g13470
Cluster HCCA cluster: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AT4G19490 ATVPS54, VPS54 VPS54 0.03 Gene family
GSVIVT01037972001 No alias 35.2 not assigned.unknown Putative homolog of yeast... 0.02 Gene family
Solyc02g030100.3.1 Solyc02g030100.3 35.2 not assigned.unknown Putative homolog of yeast... 0.03 Gene family
Solyc02g030105.1.1 Solyc02g030105.1 35.2 not assigned.unknown Putative homolog of yeast... 0.03 Gene family
Zm00001d004396 GRMZM2G137984 35.2 not assigned.unknown Putative homolog of yeast... 0.08 Gene family

Type GO Term Name Evidence Source
BP GO:0042147 retrograde transport, endosome to Golgi IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012501 Vps54_C 722 852
No external refs found!