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  5. Zm00001e036395_P002

Zm00001e036395_P002 (PAC1, Zm00001e036395)


Aliases : PAC1, Zm00001e036395

Description : component alpha type-3 of 26S proteasome


Gene families : OG0004222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004222_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036395_P002
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT4G15165 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 OrthoFinder output from all 47 species
Adi_g022952 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ala_g13312 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Ceric.04G045700.1 PAC1, Ceric.04G045700 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cre10.g418100 PAC1 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
LOC_Os06g07140.1 PAC1, LOC_Os06g07140 component alpha type-3 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Ore_g03953 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.05 OrthoFinder output from all 47 species
Pnu_g06175 PAC1 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Tin_g00589 PAC1 EC_3.4 hydrolase acTing on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010965 regulation of mitotic sister chromatid separation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
BP GO:0090231 regulation of spindle checkpoint IEP HCCA
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901976 regulation of cell cycle checkpoint IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1903504 regulation of mitotic spindle checkpoint IEP HCCA
BP GO:1905818 regulation of chromosome separation IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 214
IPR000426 Proteasome_asu_N 5 27
No external refs found!