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  5. Zm00001e036139_P002

Zm00001e036139_P002 (Zm00001e036139)


Aliases : Zm00001e036139

Description : poly(A) RNA polymerase regulatory protein


Gene families : OG0002071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036139_P002
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g015606 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.02 OrthoFinder output from all 47 species
Adi_g115433 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.02 OrthoFinder output from all 47 species
Aop_g01555 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.02 OrthoFinder output from all 47 species
Azfi_s0035.g025597 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001628.7 ATPABN1, PABN1 RNA processing.RNA 3-end polyadenylation.poly(A) RNA... 0.03 OrthoFinder output from all 47 species
Cre06.g274500 ATPABN1, PABN1 RNA processing.RNA 3-end polyadenylation.poly(A) RNA... 0.02 OrthoFinder output from all 47 species
Dac_g11373 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.02 OrthoFinder output from all 47 species
Len_g01008 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.03 OrthoFinder output from all 47 species
MA_158483g0010 No alias poly(A) RNA polymerase regulatory protein 0.02 OrthoFinder output from all 47 species
Nbi_g04034 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.07 OrthoFinder output from all 47 species
Pir_g04172 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.02 OrthoFinder output from all 47 species
Tin_g01557 No alias regulatory protein of poly(A) RNA polymerase activity &... 0.04 OrthoFinder output from all 47 species
Zm00001e030830_P002 Zm00001e030830 poly(A) RNA polymerase regulatory protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009143 nucleoside triphosphate catabolic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 81 149
No external refs found!