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  5. Zm00001e036104_P001

Zm00001e036104_P001 (Zm00001e036104)


Aliases : Zm00001e036104

Description : transcription factor (RKD)


Gene families : OG0000385 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036104_P001
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G18790 No alias RWP-RK domain-containing protein 0.03 OrthoFinder output from all 47 species
AT1G74480 No alias RWP-RK domain-containing protein 0.03 OrthoFinder output from all 47 species
AT4G35590 No alias RWP-RK domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G66990 No alias RWP-RK domain-containing protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene14002.t1 Aspi01Gene14002 germ cell differentiation factor *(RKD) & original... 0.02 OrthoFinder output from all 47 species
Cba_g01785 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
LOC_Os06g12360.1 LOC_Os06g12360 transcription factor (RKD). RNA editing factor (MEF9) 0.03 OrthoFinder output from all 47 species
Ore_g16859 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pir_g15500 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Pp3c15_9360V3.1 Pp3c15_9360 RWP-RK domain-containing protein 0.01 OrthoFinder output from all 47 species
Ppi_g10103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 166 213
No external refs found!