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  5. Zm00001e035857_P002

Zm00001e035857_P002 (HSL1, VAL2, HSI2-L1,...)


Aliases : HSL1, VAL2, HSI2-L1, Zm00001e035857

Description : transcription factor (LAV-VAL)


Gene families : OG0001383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035857_P002
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Als_g06748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30085 HSI2, VAL1 LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25392.t1 HSL1, VAL2,... LAV-VAL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20210 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030182001 HSL1, VAL2, HSI2-L1 RNA biosynthesis.transcriptional activation.B3... 0.07 OrthoFinder output from all 47 species
LOC_Os07g37610.1 HSI2, VAL1,... transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Lfl_g28672 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_119006g0010 HSI2, VAL1 B3 domain-containing protein Os07g0679700 OS=Oryza... 0.02 OrthoFinder output from all 47 species
Mp7g03700.1 HSL1, VAL2, HSI2-L1 transcription factor (LAV-VAL) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003957 HSI2, VAL1 LAV-VAL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g06873 HSL1, VAL2, HSI2-L1 LAV-VAL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR011124 Znf_CW 636 678
IPR003340 B3_DNA-bd 370 469
No external refs found!