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  5. Zm00001e035788_P001

Zm00001e035788_P001 (Zm00001e035788)


Aliases : Zm00001e035788

Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia (sp|q94kl7|sild_forin : 100.0)


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035788_P001
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00118310 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aspi01Gene71701.t1 Aspi01Gene71701 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G056900.1 Ceric.08G056900 not classified & original description: pacid=50638438... 0.02 OrthoFinder output from all 47 species
Dde_g12998 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26529 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_05039 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46970.1 LOC_Os07g46970 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
MA_10435071g0010 No alias Xanthoxin dehydrogenase OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_57399g0020 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Nbi_g20183 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g39996 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026192 No alias not classified & original description: CDS=60-1013 0.01 OrthoFinder output from all 47 species
Spa_g12161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008424_P001 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!