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  5. Zm00001e035755_P001

Zm00001e035755_P001 (Zm00001e035755)


Aliases : Zm00001e035755

Description : component mtRPS9 of small ribosomal subunit proteome


Gene families : OG0002624 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002624_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035755_P001
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00218530 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
AT1G74970 TWN3, RPS9 ribosomal protein S9 0.02 OrthoFinder output from all 47 species
AT3G49080 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.14 OrthoFinder output from all 47 species
Aev_g06058 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g06246 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aop_g10959 No alias component *(uS9m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000558 No alias component *(uS9m) of small mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g01079 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.09G015900.1 Ceric.09G015900 component *(uS9m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre02.g106750 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g00767 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01036122001 No alias Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Gb_37974 No alias component mtRPS9 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
LOC_Os07g46440.1 LOC_Os07g46440 component mtRPS9 of small ribosomal subunit proteome 0.17 OrthoFinder output from all 47 species
Len_g11641 No alias component *(uS9m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g01771 No alias component *(uS9m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_10434552g0010 No alias component mtRPS9 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Nbi_g00484 TWN3, RPS9 component *(uS9c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g24751 No alias component *(uS9m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc10g080160.2.1 Solyc10g080160 component mtRPS9 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Tin_g01995 No alias component *(uS9m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090730 Las1 complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 294 414
No external refs found!