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  5. Zm00001e035712_P002

Zm00001e035712_P002 (ATDEF1, PDF1A, Zm00001e035712)


Aliases : ATDEF1, PDF1A, Zm00001e035712

Description : formylmethionine deformylase (PDF)


Gene families : OG0007852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035712_P002

Target Alias Description ECC score Gene Family Method Actions
Aop_g19861 ATDEF1, PDF1A EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.85 DEF2, ATDEF2, PDF1B Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
GSVIVT01017280001 ATDEF1, PDF1A Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_04790 ATDEF1, PDF1A formylmethionine deformylase (PDF) 0.04 OrthoFinder output from all 47 species
LOC_Os01g37510.1 ATDEF1, PDF1A,... formylmethionine deformylase (PDF) 0.09 OrthoFinder output from all 47 species
Spa_g54623 ATDEF1, PDF1A EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 71 233
No external refs found!