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Aliases : Zm00001e035711
Description : component SYF1/MAC9 of non-snRNP MOS4-associated complex
Gene families : OG0005359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005359_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e035711_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00060p00216060 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G28740 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g108555 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g02364 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G080100.1 | Ceric.09G080100 | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001206.15 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g513500 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g11758 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04960 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g20388 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01006714001 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_19093 | No alias | component SYF1/MAC9 of non-snRNP MOS4-associated complex | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os07g44970.1 | LOC_Os07g44970 | component SYF1/MAC9 of non-snRNP MOS4-associated complex | 0.09 | OrthoFinder output from all 47 species | |
| Len_g30937 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10437082g0020 | No alias | component SYF1/MAC9 of non-snRNP MOS4-associated complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g15330.1 | No alias | component SYF1/MAC9 of non-snRNP MOS4-associated complex | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10008 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03970 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018663 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14250 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species | |
| Smo79566 | No alias | RNA processing.RNA splicing.spliceosome-associated... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g086990.3.1 | Solyc01g086990 | component SYF1/MAC9 of non-snRNP MOS4-associated complex | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g14889 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g04174 | No alias | component *(SYF1/MAC9) of MAC spliceosome-associated... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 276 | 298 |
| No external refs found! |