Zm00001e035487_P001 (PDCB2, E13L3, Zm00001e035487)


Aliases : PDCB2, E13L3, Zm00001e035487

Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana (sp|q9fz86|pdcb3_arath : 117.0)


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035487_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00250830 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00163410 PDCB5,... PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G18650 PDCB3 plasmodesmata callose-binding protein 3 0.05 OrthoFinder output from all 47 species
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G35740 No alias Carbohydrate-binding X8 domain superfamily protein 0.07 OrthoFinder output from all 47 species
AT5G53610 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g042059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38371 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04282.t1 Aspi01Gene04282 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48986.t1 Aspi01Gene48986 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69675.t1 Aspi01Gene69675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009829 No alias not classified & original description: CDS=275-1165 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046176 No alias not classified & original description: CDS=153-617 0.03 OrthoFinder output from all 47 species
Azfi_s0259.g060656 No alias not classified & original description: CDS=357-1106 0.05 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G019400.1 Ceric.03G019400 not classified & original description: pacid=50572611... 0.07 OrthoFinder output from all 47 species
Ceric.09G086200.1 Ceric.09G086200 not classified & original description: pacid=50588590... 0.03 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.02 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.02 OrthoFinder output from all 47 species
Dac_g01899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00456 PDCB2, E13L3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g31341 PDCB2, E13L3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007873001 PDCB3 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01014068001 No alias Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea 0.06 OrthoFinder output from all 47 species
GSVIVT01021412001 No alias Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum 0.03 OrthoFinder output from all 47 species
GSVIVT01036726001 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os01g55820.1 LOC_Os01g55820 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os03g30830.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g34660.1 PDCB5, LOC_Os06g34660 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species
Len_g04122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g35967 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_210389g0010 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g07659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g24416 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g62036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012023 No alias not classified & original description: CDS=866-1510 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015092 No alias not classified & original description: CDS=288-854 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024478 No alias not classified & original description: CDS=949-2307 0.04 OrthoFinder output from all 47 species
Sam_g06584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g062020.2.1 Solyc07g062020 Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Solyc11g012580.2.1 Solyc11g012580 Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g09804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016347_P001 Zm00001e016347 Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea... 0.03 OrthoFinder output from all 47 species
Zm00001e032121_P001 PDCB1, Zm00001e032121 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 224 294
No external refs found!