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  5. Zm00001e035341_P001

Zm00001e035341_P001 (Zm00001e035341)


Aliases : Zm00001e035341

Description : no hits & (original description: none)


Gene families : OG0002617 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035341_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G44260 No alias Plant protein of unknown function (DUF946) 0.05 OrthoFinder output from all 47 species
Gb_29516 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g51150.1 LOC_Os03g51150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g38840.1 LOC_Os07g38840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_101930g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_477653g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Smo231324 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g081620.3.1 Solyc01g081620 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc04g050140.3.1 Solyc04g050140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g18465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000346_P001 Zm00001e000346 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009291 Vps62 21 556
No external refs found!