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  5. Zm00001e035290_P002

Zm00001e035290_P002 (TIC20, Zm00001e035290)


Aliases : TIC20, Zm00001e035290

Description : component Tic20-I/IV of inner envelope TIC-20 complex


Gene families : OG0005319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035290_P002

Target Alias Description ECC score Gene Family Method Actions
AT1G04940 TIC20 translocon at the inner envelope membrane of chloroplasts 20 0.05 OrthoFinder output from all 47 species
Adi_g050694 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
Azfi_s0211.g058124 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01009769001 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
LOC_Os07g38110.1 LOC_Os07g38110 component Tic20-I/IV of inner envelope TIC-20 complex 0.04 OrthoFinder output from all 47 species
Mp3g05820.1 TIC20 component Tic20-I/IV of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Msp_g23898 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
Solyc04g076740.3.1 TIC20, Solyc04g076740 component Tic20-I/IV of inner envelope TIC-20 complex 0.05 OrthoFinder output from all 47 species
Solyc05g054720.3.1 TIC20, Solyc05g054720 component Tic20-I/IV of inner envelope TIC-20 complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 81 244
No external refs found!