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  5. Zm00001e035004_P001

Zm00001e035004_P001 (Zm00001e035004)


Aliases : Zm00001e035004

Description : transcription factor (CAMTA)


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035004_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G16150 No alias calmodulin binding;transcription regulators 0.04 OrthoFinder output from all 47 species
Adi_g022445 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081423 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13747 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72267.t1 CAMTA3, SR1,... CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G070500.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g46224 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_35918 CAMTA3, SR1 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
LOC_Os07g30774.1 LOC_Os07g30774 transcription factor (CAMTA) 0.04 OrthoFinder output from all 47 species
LOC_Os07g43030.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
Mp7g03150.1 CAMTA3, SR1 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Nbi_g09186 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08907 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17074 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35915 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010659 No alias CAMTA-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Solyc01g060170.4.1 Solyc01g060170 Calmodulin-binding transcription activator 5... 0.03 OrthoFinder output from all 47 species
Solyc01g105230.4.1 Solyc01g105230 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Tin_g21019 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008367_P002 Zm00001e008367 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species
Zm00001e014579_P001 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005559 CG-1_dom 34 146
IPR000048 IQ_motif_EF-hand-BS 797 816
IPR000048 IQ_motif_EF-hand-BS 878 897
IPR000048 IQ_motif_EF-hand-BS 774 792
IPR020683 DUF3447 556 634
No external refs found!