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  5. Zm00001e035003_P001

Zm00001e035003_P001 (NDF4, Zm00001e035003)


Aliases : NDF4, Zm00001e035003

Description : component PnsB3/NDF4 of NDH subcomplex B


Gene families : OG0003280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035003_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00146830 NDF4,... Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
AT3G16250 NDF4 NDH-dependent cyclic electron flow 1 0.1 OrthoFinder output from all 47 species
Aev_g18850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11649 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g12699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15463 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.08G016600.1 Ceric.08G016600 not classified & original description: pacid=50638657... 0.05 OrthoFinder output from all 47 species
Dcu_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00345 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01017041001 NDF4 Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 OrthoFinder output from all 47 species
GSVIVT01035716001 No alias Photosynthetic NDH subunit of subcomplex B 3,... 0.12 OrthoFinder output from all 47 species
Gb_23465 No alias Photosynthetic NDH subunit of subcomplex B 3,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g30670.1 NDF4, LOC_Os07g30670 component PnsB3/NDF4 of NDH subcomplex B 0.08 OrthoFinder output from all 47 species
Ore_g28145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002590 No alias not classified & original description: CDS=71-655 0.04 OrthoFinder output from all 47 species
Solyc08g083360.3.1 NDF4, Solyc08g083360 component PnsB3/NDF4 of NDH subcomplex B 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 119 167
No external refs found!