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  5. Zm00001e034829_P001

Zm00001e034829_P001 (RHA3A, Zm00001e034829)


Aliases : RHA3A, Zm00001e034829

Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034829_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 OrthoFinder output from all 47 species
AT2G17450 RHA3A RING-H2 finger A3A 0.04 OrthoFinder output from all 47 species
AT3G43430 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G38140 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g045665 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g38248 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15556 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g02285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70935.t1 ATL6, Aspi01Gene70935 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0093.g043306 No alias not classified & original description: CDS=1-900 0.03 OrthoFinder output from all 47 species
Ceric.34G056700.1 Ceric.34G056700 not classified & original description: pacid=50623881... 0.03 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os12g24490.1 LOC_Os12g24490 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Len_g10552 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
MA_46635g0010 BRH1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_611616g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_85088g0010 No alias RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Nbi_g03406 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g20219 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Ppi_g26079 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc01g095810.3.1 Solyc01g095810 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc04g054370.1.1 BRH1, Solyc04g054370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc08g081370.1.1 BRH1, Solyc08g081370 E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc10g081790.1.1 Solyc10g081790 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g03237 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g06983 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g09550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38079 MEE16 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e009142_P001 Zm00001e009142 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 122 166
No external refs found!