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  5. Zm00001e034827_P002

Zm00001e034827_P002 (Zm00001e034827)


Aliases : Zm00001e034827

Description : E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana (sp|q9lt17|bbr_arath : 166.0)


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034827_P002

Target Alias Description ECC score Gene Family Method Actions
Adi_g056115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14235 BB2, BB E3 ubiquitin ligase *(EOD1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g08523 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.02G025700.1 Ceric.02G025700 E3 ubiquitin ligase *(EOD1) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01032082001 BB2, BB Protein degradation.peptide tagging.Ubiquitin... 0.05 OrthoFinder output from all 47 species
Mp4g17160.1 No alias E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g03370 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Solyc02g005480.4.1 Solyc02g005480 E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc11g062260.3.1 BB2, BB, Solyc11g062260 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e010240_P002 Zm00001e010240 E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 269 297
No external refs found!