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  5. Zm00001e034748_P001

Zm00001e034748_P001 (AtPP2-A13, PP2-A13,...)


Aliases : AtPP2-A13, PP2-A13, Zm00001e034748

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034748_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00203100 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G33920 ATPP2-A4, PP2-A4 phloem protein 2-A4 0.04 OrthoFinder output from all 47 species
AT2G02250 AtPP2-B2, PP2-B2 phloem protein 2-B2 0.03 OrthoFinder output from all 47 species
AT2G02300 PP2-B5, AtPP2-B5 phloem protein 2-B5 0.03 OrthoFinder output from all 47 species
AT4G19840 PP2-A1,... phloem protein 2-A1 0.03 OrthoFinder output from all 47 species
AT5G24560 AtPP2-B12, PP2-B12 phloem protein 2-B12 0.03 OrthoFinder output from all 47 species
Aev_g08542 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19624 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04871 AtPP2-B7, PP2-B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40459.t1 PP2-A15,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0322.g064518 No alias not classified & original description: CDS=191-1105 0.03 OrthoFinder output from all 47 species
Azfi_s2399.g111181 No alias not classified & original description: CDS=192-1106 0.04 OrthoFinder output from all 47 species
Cba_g09552 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18479 MEE66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019353001 ATPP2-A4, PP2-A4 Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01027514001 AtPP2-A13, PP2-A13 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01031160001 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g56750.1 AtPP2-B1,... F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56810.1 AtPP2-B2,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g35680.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.05 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10434357g0020 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39207 AtPP2-B1, PP2-B1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50603 PP2-A1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00553 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39124 AtPP2-B10, PP2-B10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002865 No alias not classified & original description: CDS=117-1025 0.03 OrthoFinder output from all 47 species
Solyc01g100010.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc02g031750.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g056710.3.1 AtPP2-B10,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g008820.3.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Tin_g41948 PP2-B4, AtPP2-B4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016194_P002 AtPP2-B1,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 60
IPR025886 PP2-like 126 283
No external refs found!