Zm00001e034733_P001 (FKP1, EMB2778, MVA1,...)

Aliases : FKP1, EMB2778, MVA1, HMGS, Zm00001e034733

Description : 3-hydroxy-3-methylglutaryl-CoA synthase

Gene families : OG0002570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002570_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e034733_P001
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
Als_g15686	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g16340	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02043	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000662	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: CDS=211-1596	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009988	FKP1, EMB2778, MVA1, HMGS	EC_2.3 acyltransferase & original description: CDS=248-1342	0.02	OrthoFinder output from all 47 species
Solyc08g080170.3.1	FKP1, EMB2778,...	3-hydroxy-3-methylglutaryl-CoA synthase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004421	hydroxymethylglutaryl-CoA synthase activity	IEA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	IEA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013746	HMG_CoA_synt_C_dom	176	450
IPR013528	HMG_CoA_synth_N	4	175

External Links

No external refs found!