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  5. Zm00001e034728_P002

Zm00001e034728_P002 (PRH75, Zm00001e034728)


Aliases : PRH75, Zm00001e034728

Description : DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa subsp. japonica (sp|q650t9|rh7_orysj : 865.0)


Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034728_P002
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AT3G22310 PMH1, ATRH9 putative mitochondrial RNA helicase 1 0.03 OrthoFinder output from all 47 species
AT5G62190 PRH75 DEAD box RNA helicase (PRH75) 0.05 OrthoFinder output from all 47 species
Adi_g054902 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06747 emb1138 group-II intron splicing RNA helicase *(PMH) & original... 0.03 OrthoFinder output from all 47 species
Aev_g11630 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10440 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Ala_g14982 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08480 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25330.t1 emb1138, Aspi01Gene25330 group-II intron splicing RNA helicase *(RH3) & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G054800.1 emb1138, Ceric.06G054800 not classified & original description: pacid=50619432... 0.02 OrthoFinder output from all 47 species
Ceric.17G055300.1 emb1138, Ceric.17G055300 group-II intron splicing RNA helicase *(RH3) & original... 0.03 OrthoFinder output from all 47 species
Cre02.g118300 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Dcu_g10256 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g34910.1 PRH75, LOC_Os09g34910 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
MA_17924g0020 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.02 OrthoFinder output from all 47 species
Pnu_g13894 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c1_40060V3.1 emb1138, Pp3c1_40060 DEAD box RNA helicase (RH3) 0.02 OrthoFinder output from all 47 species
Smo150370 PRH75 DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc06g035450.4.1 PRH75, Solyc06g035450 DEAD-box ATP-dependent RNA helicase 7 OS=Spinacia... 0.04 OrthoFinder output from all 47 species
Solyc07g044760.3.1 PMH2, ATRH53,... RNA helicase (PMH) 0.04 OrthoFinder output from all 47 species
Spa_g08414 emb1138 group-II intron splicing RNA helicase *(RH3) & original... 0.05 OrthoFinder output from all 47 species
Tin_g13858 PRH75 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012562 GUCT 556 651
IPR001650 Helicase_C 367 466
IPR011545 DEAD/DEAH_box_helicase_dom 145 323
No external refs found!