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  5. Zm00001e034628_P001

Zm00001e034628_P001 (SPL13, SPL13A, Zm00001e034628)


Aliases : SPL13, SPL13A, Zm00001e034628

Description : transcription factor (SBP)


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034628_P001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 SPL13, SPL13A,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00235390 SPL8,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00217130 SPL2,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Adi_g015319 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058139 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087512 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112854 SPL10 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07305 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08078 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10292 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17452 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22799 SPL13, SPL13A SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04360 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08975 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11381 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13927 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33190 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46381 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47133 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17306 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08472 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10734 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14484.t1 SPL3, Aspi01Gene14484 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20298.t1 SPL8, Aspi01Gene20298 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26291.t1 SPL3, Aspi01Gene26291 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27773.t1 SPL3, Aspi01Gene27773 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67363.t1 SPL8, Aspi01Gene67363 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001662 SPL7, ATSPL7 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g10627 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26518 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26615 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32859 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34343 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G021600.1 SPL2, Ceric.20G021600 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g27848 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14927 SPL3 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18765 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36276 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13667 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09070 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15224 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31810 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008556001 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
GSVIVT01018205001 SPL2 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
GSVIVT01021087001 SPL3 RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_03921 SPL8 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Gb_03922 SPL2 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Gb_26600 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_38013 SPL2 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_38014 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g45310.1 SPL11, LOC_Os06g45310 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g49010.4 SPL2, LOC_Os06g49010 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os07g32170.1 SPL4, LOC_Os07g32170 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17980 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41015 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48733 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16004 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24530 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32603 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43322 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g14903 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18194 SPL3 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23336 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37559 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01646 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47425 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48099 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48701 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24495 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63266 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256 SPL2 SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971 SPL8 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14898 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30123 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Smo79699 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
Solyc05g015840.3.1 SPL13, SPL13A,... transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Spa_g15612 SPL7, ATSPL7 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09011 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10032 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13693 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003546_P002 AtSPL9, SPL9,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e010124_P002 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Zm00001e013795_P002 SPL8, Zm00001e013795 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e025110_P001 SPL8, Zm00001e025110 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e028442_P002 SPL13, SPL13A,... transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 120 193
No external refs found!