Aliases : XERICO, Zm00001e034469
Description : ubiquitin protein ligase (XERICO)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e034469_P001 | |
Cluster | HCCA: Cluster_146 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G24580 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT1G49220 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G16720 | ATL2, TL2 | TOXICOS EN LEVADURA 2 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g011787 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g043726 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g06976 | XERICO | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g12179 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g04809 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g23533 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g34929 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g04240 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13505 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene01421.t1 | Aspi01Gene01421 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0051.g031286 | No alias | not classified & original description: CDS=1-726 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0163.g054250 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g21909 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g56414 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.12G062900.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G039000.1 | Ceric.25G039000 | not classified & original description: pacid=50594534... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.29G079900.1 | ATL6, Ceric.29G079900 | not classified & original description: pacid=50625410... | 0.06 | OrthoFinder output from all 47 species | |
Dac_g28799 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25304 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01013145001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Gb_28973 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.03 | OrthoFinder output from all 47 species | |
Gb_28980 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g37740.1 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g36310.1 | LOC_Os05g36310 | RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g12680.1 | LOC_Os06g12680 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g06560.1 | LOC_Os07g06560 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g06090.1 | RHA3B, LOC_Os08g06090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g39450.1 | RHA3B, LOC_Os10g39450 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Len_g20513 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Len_g23816 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_611616g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_6931619g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_88044g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_94359g0010 | RHA3B | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Ore_g10421 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g15928 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g02803 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g18570 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000797 | ATL8 | not classified & original description: CDS=1-573 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003753 | RHA3B | not classified & original description: CDS=1-771 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0044.g013072 | ATL8 | not classified & original description: CDS=1-573 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0104.g020113 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g01259 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g24936 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g38481 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e015259_P001 | Zm00001e015259 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015905_P001 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 99 | 143 |
No external refs found! |