Zm00001e034238_P001 (Zm00001e034238)

Aliases : Zm00001e034238

Description : transcription factor (ARID)

Gene families : OG0002902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002902_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e034238_P001

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00129p00111730	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.ARID...	0.03	OrthoFinder output from all 47 species
Ala_g10885	No alias	component *(ARID5) of ISWI chromatin remodeling complex...	0.02	OrthoFinder output from all 47 species
Ceric.01G059600.1	Ceric.01G059600	component *(ARID5) of ISWI chromatin remodeling complex...	0.03	OrthoFinder output from all 47 species
Ceric.26G036800.1	Ceric.26G036800	component *(ARID5) of ISWI chromatin remodeling complex...	0.03	OrthoFinder output from all 47 species
LOC_Os09g26390.1	LOC_Os09g26390	transcription factor (ARID)	0.02	OrthoFinder output from all 47 species
Mp2g17360.1	No alias	transcription factor (ARID)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001606	ARID_dom	582	679

External Links

No external refs found!