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Aliases : ATCAF1, CAF1, Zm00001e033422
Description : component CAF of CRS2-CAF plastidial RNA splicing factor complexes
Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e033422_P001 | |
| Cluster | HCCA: Cluster_124 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G20020 | ATCAF1, CAF1 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02604 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g34328 | ATCAF1, CAF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13815 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g08762 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10432369g0010 | ATCAF1, CAF1 | CRS2-associated factor 2, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g08475 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g36626 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03045 | ATCAF1, CAF1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26827 | No alias | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g06701 | CAF2, ATCAF2 | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |