Aliases : BP, BP1, KNAT1, Zm00001e032761
Description : transcription factor (KNOX)
Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e032761_P001 | |
Cluster | HCCA: Cluster_105 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G62360 | BUM1, SHL, STM,... | KNOX/ELK homeobox transcription factor | 0.02 | OrthoFinder output from all 47 species | |
AT1G70510 | KNAT2, ATK1 | KNOTTED-like from Arabidopsis thaliana 2 | 0.05 | OrthoFinder output from all 47 species | |
AT4G08150 | BP, BP1, KNAT1 | KNOTTED-like from Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT5G11060 | KNAT4 | KNOTTED1-like homeobox gene 4 | 0.03 | OrthoFinder output from all 47 species | |
AT5G25220 | KNAT3 | KNOTTED1-like homeobox gene 3 | 0.04 | OrthoFinder output from all 47 species | |
Adi_g019966 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g060986 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g05964 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g15588 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g31921 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g51107 | BP, BP1, KNAT1 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g31169 | KNAT5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g27530 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0006.g009595 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: CDS=1-1050 | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0350.g066569 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: CDS=1-1488 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g09026 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G064800.1 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g03900 | BP, BP1, KNAT1 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01004811001 | BUM1, SHL, STM,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01007715001 | KNAT6, KNAT6L, KNAT6S | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009273001 | BP, BP1, KNAT1 | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01013790001 | KNAT6, KNAT6L, KNAT6S | RNA biosynthesis.transcriptional activation.HB... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01031241001 | KNAT6, KNAT6L, KNAT6S | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g19694.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g51690.2 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g51710.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os03g56140.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g03884.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os07g03770.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Ore_g07720 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g25497 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g25529 | BP, BP1, KNAT1 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g31220 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g37281 | BP, BP1, KNAT1 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g10499 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0250.g026748 | KNAT3 | KNOX-type transcription factor & original description: CDS=1-885 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g36645 | No alias | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo90744 | KNAT3 | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
Solyc02g081120.4.1 | BUM1, SHL, STM,... | transcription factor (KNOX) | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g077210.3.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g005090.4.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e005825_P002 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e039044_P001 | KNAT7, IXR11,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |