Aliases : EMB2750, Zm00001e032726
Description : Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana (sp|q9squ6|pp216_arath : 580.0)
Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G06430 | EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G53170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G39620 | EMB2453, ATPPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0174.g055903 | EMB2453, ATPPR5 | not classified & original description: CDS=133-1563 | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g02809 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01017677001 | EMB2750 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028689001 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00230 | No alias | Pentatricopeptide repeat-containing protein At3g06430,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36199 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein At4g39620,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_37344 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g07550.1 | LOC_Os06g07550 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g27398 | EMB2453, ATPPR5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g30371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0066.g016075 | No alias | not classified & original description: CDS=33-1412 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0080.g017959 | EMB2453, ATPPR5 | not classified & original description: CDS=1-1101 | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g057200.4.1 | EMB2750, Solyc01g057200 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g098990.2.1 | EMB2750, Solyc12g098990 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g12418 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0008483 | transaminase activity | IEP | HCCA |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |