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  5. Zm00001e032559_P001

Zm00001e032559_P001 (RPN13, Zm00001e032559)


Aliases : RPN13, Zm00001e032559

Description : regulatory component RPN13 of 26S proteasome


Gene families : OG0005876 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005876_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032559_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00208510 RPN13,... Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037247 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ceric.29G052500.1 RPN13, Ceric.29G052500 regulatory component *(RPN13) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Cre11.g469450 RPN13 Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os05g51640.1 RPN13, LOC_Os05g51640 regulatory component RPN13 of 26S proteasome 0.04 OrthoFinder output from all 47 species
MA_9823091g0010 RPN13 regulatory component RPN13 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015566 RPN13 regulatory component *(RPN13) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Solyc07g017400.3.1 RPN13, Solyc07g017400 regulatory component RPN13 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006474 N-terminal protein amino acid acetylation IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0017196 N-terminal peptidyl-methionine acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018206 peptidyl-methionine modification IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031414 N-terminal protein acetyltransferase complex IEP HCCA
CC GO:0031417 NatC complex IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR006773 Rpn13/ADRM1 17 98
IPR032368 RPN13_DEUBAD 174 287
No external refs found!