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  5. Zm00001e032440_P001

Zm00001e032440_P001 (Zm00001e032440)


Aliases : Zm00001e032440

Description : no hits & (original description: none)


Gene families : OG0008375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032440_P001

Target Alias Description ECC score Gene Family Method Actions
Ala_g13763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1387.g102500 No alias not classified & original description: CDS=106-1104 0.03 OrthoFinder output from all 47 species
Dcu_g14380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g49060.1 LOC_Os05g49060 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_104296g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g08397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025347 No alias not classified & original description: CDS=1-1002 0.04 OrthoFinder output from all 47 species
Sam_g28855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo271184 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g070800.2.1 Solyc02g070800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g21936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR007570 Uncharacterised_Ycf23 89 287
No external refs found!