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  5. Zm00001e032303_P001

Zm00001e032303_P001 (Zm00001e032303)


Aliases : Zm00001e032303

Description : PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana (sp|q947d2|praf1_arath : 888.0)


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032303_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G19420 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 OrthoFinder output from all 47 species
Adi_g014208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037259001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Gb_27545 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os02g45980.1 LOC_Os02g45980 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01610.1 PRAF1, LOC_Os05g01610 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46740.1 LOC_Os05g46740 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Nbi_g12010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g005590.2.1 Solyc03g005590 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
Zm00001e018599_P001 Zm00001e018599 PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 368 417
IPR000408 Reg_chr_condens 433 479
IPR000408 Reg_chr_condens 313 363
IPR000408 Reg_chr_condens 482 531
IPR000408 Reg_chr_condens 262 310
IPR000408 Reg_chr_condens 536 583
IPR027988 BRX_N 833 865
IPR013591 Brevis_radix_dom 951 1004
IPR000306 Znf_FYVE 587 653
No external refs found!