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Aliases : ATTZF1, ATCTH, Zm00001e032199
Description : mRNA-binding regulatory factor (TZF)
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G03790 | SOM | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.08 | OrthoFinder output from all 47 species | |
| AT2G40140 | SZF2, ATSZF2, ZFAR1, CZF1 | zinc finger (CCCH-type) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT4G29190 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G07500 | PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g075797 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22406 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07949 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g20797 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene68944.t1 | Aspi01Gene68944 | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037758 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G100900.1 | Ceric.05G100900 | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G002100.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z168000.1 | ATTZF1, ATCTH,... | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Cre03.g146267 | ATTZF1, ATCTH | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g02872 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14938 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05999 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01013901001 | PEI1 | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024728001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g53650.1 | LOC_Os01g53650 | mRNA-binding regulatory factor (TZF) | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os05g10670.1 | LOC_Os05g10670 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g45020.1 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g33090.1 | LOC_Os12g33090 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g55937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05681 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06722 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| MA_11306g0010 | No alias | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05906 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g05173 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g49541 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15715 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g16736 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20981 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005148 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g043247.1.1 | ATTZF1, ATCTH,... | mRNA-binding regulatory factor (TZF) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc06g082010.4.1 | Solyc06g082010 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g053750.1.1 | SOM, Solyc07g053750 | mRNA-binding regulatory factor (TZF) | 0.09 | OrthoFinder output from all 47 species | |
| Solyc09g014640.2.1 | PEI1, Solyc09g014640 | mRNA-binding regulatory factor (TZF) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc09g014645.1.1 | PEI1, Solyc09g014645 | mRNA-binding regulatory factor (TZF) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc09g150108.1.1 | PEI1, Solyc09g150108 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g008660.1.1 | Solyc12g008660 | mRNA-binding regulatory factor (TZF) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53224 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53900 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16529 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016582_P001 | Zm00001e016582 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027132_P001 | Zm00001e027132 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029465_P001 | Zm00001e029465 | mRNA-binding regulatory factor (TZF) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |