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  5. Zm00001e032148_P001

Zm00001e032148_P001 (ATRABA1B, RAB11,...)


Aliases : ATRABA1B, RAB11, RABA1b, Zm00001e032148

Description : A-class RAB GTPase


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032148_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G05810 ARA-1, ATRABA5E,... RAB GTPase homolog A5E 0.03 OrthoFinder output from all 47 species
AT5G45750 RABA1c, AtRABA1c RAB GTPase homolog A1C 0.04 OrthoFinder output from all 47 species
Aev_g17596 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18147 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31350 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04921 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01569 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01612 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22467 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29497.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33156.t1 AtRABA5d,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60173.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69385.t1 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11161 ATRABA2A,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G022800.1 AtRABA1f,... A-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G031600.1 ATRABA5C, ARA4,... A-class RAB GTPase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g01462 ATRABA2A,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02569 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g46356 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03700 ARA-1, ATRABA5E,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005281001 AtRABA5b, RABA5b Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Gb_18969 AtRABA1f, RABA1f Ras-related protein RABA1d OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62600.1 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44070.1 ATRABA1B, RAB11,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os06g35814.1 ATHSGBP, RABA1d,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os08g41340.1 AtRABA5d,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g02212 AtRABA5d, RABA5d not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02647 RAB-A2C,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03672 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03776 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30458 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430522g0010 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_18685g0010 AtRABA5d, RABA5d A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Msp_g05544 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09974 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36456 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04633 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15644 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14192 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27361 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10152 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15145 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08711 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61287 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026297 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=308-952 0.04 OrthoFinder output from all 47 species
Smo230012 AtRABA5d, RABA5d Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Solyc02g072180.3.1 ATHSGBP, RABA1d,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Solyc09g098170.4.1 AtRABA5d,... A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Solyc10g045550.2.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc12g014080.2.1 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g12437 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16289 ATRABA2A,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 19 179
No external refs found!