Aliases : ARF3, ETT, Zm00001e032135
Description : transcription factor (ARF)
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00198750 | ARF19, IAA22,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00155p00082980 | ARF16,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AT4G30080 | ARF16 | auxin response factor 16 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g084657 | ARF19, IAA22, ARF11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g32730 | TIR5, MSG1,... | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g40259 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g49574 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g51944 | ARF19, IAA22, ARF11 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g22304 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene33428.t2 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g58910 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ceric.18G034300.1 | ARF16, Ceric.18G034300 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.28G004000.1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g44007 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g14113 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01020805001 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
Gb_39686 | ARF6 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g48060.1 | ARF3, ETT, LOC_Os01g48060 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g57610.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os05g43920.1 | ARF3, ETT, LOC_Os05g43920 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g48870.1 | ARF3, ETT, LOC_Os05g48870 | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os11g32110.1 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05750 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g15236 | ARF1 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g06380 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g06724 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo438333 | TIR5, MSG1,... | Auxin response factor 11 OS=Oryza sativa subsp. indica | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g056040.3.1 | ARF11, Solyc05g056040 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g069190.2.1 | ARF4, Solyc11g069190 | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e008040_P002 | ARF1, Zm00001e008040 | transcription factor (ARF) | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e018761_P001 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e021527_P006 | HSS, ARF1-BP,... | transcription factor (ARF) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e032423_P002 | ARF3, ETT, Zm00001e032423 | transcription factor (ARF) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
No external refs found! |