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  5. Zm00001e032102_P001

Zm00001e032102_P001 (BRCA1, ATBRCA1, Zm00001e032102)


Aliases : BRCA1, ATBRCA1, Zm00001e032102

Description : component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage response heterodimer


Gene families : OG0001776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001776_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032102_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00180030 BRCA1, ATBRCA1,... DNA damage response.BRCA1–BARD1 DNA-damage response... 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00067800 BRCA1, ATBRCA1,... DNA damage response.BRCA1–BARD1 DNA-damage response... 0.07 OrthoFinder output from all 47 species
AT1G04020 BARD1, ROW1, ATBARD1 breast cancer associated RING 1 0.07 OrthoFinder output from all 47 species
Als_g14546 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Als_g16524 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.08 OrthoFinder output from all 47 species
Aop_g08732 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.06 OrthoFinder output from all 47 species
Aop_g10443 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.06 OrthoFinder output from all 47 species
Aspi01Gene06963.t1 BRCA1, ATBRCA1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Aspi01Gene29593.t1 BRCA1, ATBRCA1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Ceric.16G078600.1 BARD1, ROW1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.07 OrthoFinder output from all 47 species
Ceric.19G066200.1 BRCA1, ATBRCA1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.09 OrthoFinder output from all 47 species
Ceric.30G011100.1 BARD1, ROW1,... component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.14 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 OrthoFinder output from all 47 species
Cre07.g334650 No alias DNA damage response.BRCA1–BARD1 DNA-damage response... 0.02 OrthoFinder output from all 47 species
Dac_g10577 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.02 OrthoFinder output from all 47 species
Dac_g15330 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Dcu_g10242 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.07 OrthoFinder output from all 47 species
Dcu_g42186 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Gb_00493 BRCA1, ATBRCA1 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.06 OrthoFinder output from all 47 species
LOC_Os04g43300.1 BARD1, ROW1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.04 OrthoFinder output from all 47 species
LOC_Os05g40810.1 BRCA1, ATBRCA1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.04 OrthoFinder output from all 47 species
LOC_Os05g43610.1 BRCA1, ATBRCA1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.08 OrthoFinder output from all 47 species
Len_g11293 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
MA_12220g0020 BRCA1, ATBRCA1 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.08 OrthoFinder output from all 47 species
MA_187851g0010 BRCA1, ATBRCA1 Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... 0.04 OrthoFinder output from all 47 species
MA_66542g0010 BRCA1, ATBRCA1 Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... 0.09 OrthoFinder output from all 47 species
Mp1g00070.1 BRCA1, ATBRCA1 component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.1 OrthoFinder output from all 47 species
Msp_g15829 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Nbi_g12141 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Nbi_g26771 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Ppi_g16822 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007705 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018874 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.04 OrthoFinder output from all 47 species
Smo414577 BARD1, ROW1, ATBARD1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Solyc06g008210.4.1 BARD1, ROW1,... component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... 0.08 OrthoFinder output from all 47 species
Spa_g04261 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.09 OrthoFinder output from all 47 species
Tin_g03296 BARD1, ROW1, ATBARD1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... 0.03 OrthoFinder output from all 47 species
Tin_g32798 BRCA1, ATBRCA1 component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 752 811
No external refs found!