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  5. Zm00001e031989_P001

Zm00001e031989_P001 (Zm00001e031989)


Aliases : Zm00001e031989

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031989_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Als_g11306 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47999.t1 Aspi01Gene47999 substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0267.g061043 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01009011001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
LOC_Os05g43490.2 LOC_Os05g43490 component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Lfl_g01772 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
MA_40961g0010 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
Mp4g07250.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.01 OrthoFinder output from all 47 species
Ore_g15459 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ore_g43491 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g19771 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ppi_g12156 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ppi_g18568 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020024 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Spa_g29905 No alias substrate adaptor *(AUF) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Tin_g05534 No alias substrate adaptor *(AUF) of SCF E3 ubiquiTin ligase... 0.02 OrthoFinder output from all 47 species
Zm00001e019495_P001 Zm00001e019495 component FBX of SCF E3 ubiquitin ligase complex 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!