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  5. Zm00001e031984_P002

Zm00001e031984_P002 (ATARFA1B, ARFA1B,...)


Aliases : ATARFA1B, ARFA1B, Zm00001e031984

Description : ARF-GTPase


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031984_P002

Target Alias Description ECC score Gene Family Method Actions
AT3G62290 ARFA1E, ATARFA1E ADP-ribosylation factor A1E 0.02 OrthoFinder output from all 47 species
Als_g39673 ATARFA1F, ARFA1F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19871 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68389 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.21 ATARFA1F, ARFA1F Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g50096 ATARFA1B, ARFA1B not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g41060.1 ATARFA1F,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os10g42940.1 ATARFB1B,... ARF-GTPase 0.09 OrthoFinder output from all 47 species
Lfl_g23069 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28928 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g07320.1 ATARFB1C, ARFB1C ARF-GTPase 0.05 OrthoFinder output from all 47 species
Ore_g07772 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g092970.3.1 ATARF1, ARF1,... ARF-GTPase 0.04 OrthoFinder output from all 47 species
Tin_g02993 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05379 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08915 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!