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  5. Zm00001e031816_P001

Zm00001e031816_P001 (PRA1.A1, Zm00001e031816)


Aliases : PRA1.A1, Zm00001e031816

Description : A-class Rab-GDF protein


Gene families : OG0002691 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031816_P001

Target Alias Description ECC score Gene Family Method Actions
Ala_g08707 PRA1.A1 A-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03024 PRA1.A1 A-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06995 PRA1.A1 A-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021179.7 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre06.g267900 PRA1.A3 Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
LOC_Os05g38160.1 PRA1.A1, LOC_Os05g38160 A-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Spa_g18164 PRA1.A1 A-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 20 192
No external refs found!