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  5. Zm00001e031682_P001

Zm00001e031682_P001 (AS2, Zm00001e031682)


Aliases : AS2, Zm00001e031682

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031682_P001
Cluster HCCA: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0076.g037915 LBD20 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g45920 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G061300.1 LBD4, Ceric.08G061300 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_07877 LBD22 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g60960.1 LBD15, ASL11,... transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Pnu_g01961 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42819 LBD20 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001297 AS2 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018622 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo68988 LOB RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
Spa_g03009 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 44 139
No external refs found!