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  5. Zm00001e031654_P001

Zm00001e031654_P001 (CLA, DXS, CLA1, DEF,...)


Aliases : CLA, DXS, CLA1, DEF, DXPS2, Zm00001e031654

Description : 1-deoxy-D-xylulose 5-phosphate synthase (DXS)


Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031654_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00123940 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.03 OrthoFinder output from all 47 species
AT4G15560 CLA, DXS, CLA1,... Deoxyxylulose-5-phosphate synthase 0.08 OrthoFinder output from all 47 species
Adi_g002037 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Aob_g06658 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Cba_g20839 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Ceric.28G050500.1 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.1 OrthoFinder output from all 47 species
Cre07.g356350 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.07 OrthoFinder output from all 47 species
Dde_g03444 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
LOC_Os05g33840.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.09 OrthoFinder output from all 47 species
Len_g06184 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Mp2g09130.1 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.06 OrthoFinder output from all 47 species
Nbi_g08983 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Ore_g43427 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Pnu_g06761 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014635 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Sam_g07986 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.06 OrthoFinder output from all 47 species
Tin_g19065 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR005477 Dxylulose-5-P_synthase 72 357
IPR033248 Transketolase_C 573 696
IPR005475 Transketolase-like_Pyr-bd 393 555
No external refs found!