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  5. Zm00001e031610_P001

Zm00001e031610_P001 (Zm00001e031610)


Aliases : Zm00001e031610

Description : Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana (sp|q84me1|lul3_arath : 271.0)


Gene families : OG0000967 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000967_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031610_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G53410 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g085386 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108121 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09526 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01738 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.36G047100.1 Ceric.36G047100 E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001668.2 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01000020001 No alias Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_39665 No alias Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g15000.1 LOC_Os03g15000 Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33000.2 LOC_Os05g33000 Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Len_g01692 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03008 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04681 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12834 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11051 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015098 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: CDS=1-966 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017116 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description:... 0.02 OrthoFinder output from all 47 species
Solyc01g098750.3.1 Solyc01g098750 Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g09974 No alias E3 ubiquitin ligase *(LOG2/LUL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001085_P001 Zm00001e001085 Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e038556_P001 Zm00001e038556 Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!