Aliases : Zm00001e031439
Description : RING-H2-class E3 ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00185200 | ATL6,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00018p00191870 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00059p00176670 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00077p00074350 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00102p00069840 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00129p00065710 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
AT2G18670 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT2G42350 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G00305 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G09120 | No alias | RING/U-box superfamily protein | 0.08 | OrthoFinder output from all 47 species | |
AT5G53110 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g044123 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g088636 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Adi_g118032 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Aev_g07783 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.09 | OrthoFinder output from all 47 species | |
Ala_g01244 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g13880 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g15539 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g22077 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g30352 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Als_g15749 | RHA3A | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g23659 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Als_g24156 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g46662 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g12685 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g16135 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g26269 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g26561 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene70383.t1 | Aspi01Gene70383 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0079.g038347 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g49099 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ceric.07G057400.1 | Ceric.07G057400 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G057700.1 | Ceric.07G057700 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.12G062900.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.30G049300.1 | Ceric.30G049300 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g14301 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g33658 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g01515 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g49887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g01188 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g41558 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g00708 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g28199 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g30092 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01018343001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Gb_04301 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Gb_20461 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Gb_33184 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Gb_40644 | BRH1 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g33720.1 | LOC_Os02g33720 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g36330.1 | LOC_Os02g36330 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g45710.1 | BRH1, LOC_Os02g45710 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g45780.1 | LOC_Os02g45780 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g29676.1 | LOC_Os05g29676 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g29710.1 | LOC_Os05g29710 | RING-H2-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os06g09310.1 | LOC_Os06g09310 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g34530.1 | ATL43, LOC_Os06g34530 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Len_g23816 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Len_g29871 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Len_g44401 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g01413 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g22489 | RHA3A | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
MA_10426163g0010 | RHA3B | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
MA_308999g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_80729g0030 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_98187g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Mp5g08270.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Msp_g36033 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g14103 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g16553 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g22108 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g34002 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g45415 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g02738 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g45759 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Pir_g49925 | No alias | regulatory ubiquitin-protein ligase *(PRU2) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g07970 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g04206 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g09130 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g09527 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g12485 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g21936 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g29641 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g47545 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000797 | ATL8 | not classified & original description: CDS=1-573 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0044.g013072 | ATL8 | not classified & original description: CDS=1-573 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0081.g018006 | XERICO | not classified & original description: CDS=1-537 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0138.g022556 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Smo412609 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Smo59303 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Solyc04g074790.3.1 | Solyc04g074790 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Spa_g11356 | XERICO | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g16818 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034008_P001 | Zm00001e034008 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005506 | iron ion binding | IEP | HCCA |
MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 239 | 282 |
No external refs found! |