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  5. Zm00001e031265_P001

Zm00001e031265_P001 (LZF1, STH3, DBB3,...)


Aliases : LZF1, STH3, DBB3, Zm00001e031265

Description : transcription factor (BBX-DBB)


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e031265_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Adi_g017902 No alias BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g115013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28425 No alias BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g20277 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00821 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os01g10580.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g43170.1 LOC_Os02g43170 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
Msp_g14313 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39045 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15051 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20549 No alias BBX class-IV transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g32526 STH BBX class-IV transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 60 92
No external refs found!