AMTR_s00003p00232080 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.229

Description : Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene synthase


Gene families : OG_01_0003623 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003623_tree ,
OG_02_0003611 (LandPlants) Phylogenetic Tree(s): OG_02_0003611_tree ,
OG_03_0003756 (SeedPlants) Phylogenetic Tree(s): OG_03_0003756_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00232080
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT4G34640 ERG9, SQS1 squalene synthase 1 0.02 LandPlants
Pp3c4_2410V3.1 No alias squalene synthase 2 0.01 LandPlants
Zm00001e011834_P002 No alias squalene synthase 0.02 LandPlants
AT4G34640 ERG9, SQS1 squalene synthase 1 0.02 SeedPlants
GSVIVT01024197001 No alias Secondary metabolism.terpenoids.terpenoid... 0.01 SeedPlants
Zm00001e011834_P002 No alias squalene synthase 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016740 transferase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002060 Squ/phyt_synthse 44 312
No external refs found!