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  5. Mp5g04390.1

Mp5g04390.1


Description : component RAD50 of MRE11-RAD50-NBS1 (MRN) complex. component RAD50 of DNA resection MRE11-RAD50-NBS1 (MRN) complex


Gene families : OG_01_0005485 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005485_tree ,
OG_02_0008197 (LandPlants) Phylogenetic Tree(s): OG_02_0008197_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g04390.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00258230 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.02 Archaeplastida
Cre03.g192550 No alias DNA damage response.DNA repair mechanisms.homologous... 0.02 Archaeplastida
Smo405818 No alias DNA damage response.DNA repair mechanisms.homologous... 0.04 Archaeplastida
Solyc05g053800.3.1 No alias component RAD50 of MRE11-RAD50-NBS1 (MRN) complex.... 0.03 Archaeplastida
AMTR_s00013p00258230 evm_27.TU.AmTr_v1... DNA damage response.DNA repair mechanisms.homologous... 0.02 LandPlants
AT2G31970 RAD50, ATRAD50 DNA repair-recombination protein (RAD50) 0.01 LandPlants
Smo405818 No alias DNA damage response.DNA repair mechanisms.homologous... 0.04 LandPlants
Solyc05g053800.3.1 No alias component RAD50 of MRE11-RAD50-NBS1 (MRN) complex.... 0.02 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013134 Zn_hook_RAD50 685 721
IPR038729 Rad50/SbcC_AAA 6 246
No external refs found!