Aliases : RAD23D, Zm00001e030951
Description : shuttle protein (RAD23)
Gene families : OG0001068 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001068_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G16190 | RAD23A | Rad23 UV excision repair protein family | 0.03 | OrthoFinder output from all 47 species | |
AT5G38470 | RAD23D | Rad23 UV excision repair protein family | 0.03 | OrthoFinder output from all 47 species | |
Aev_g45033 | RAD23D | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g63686 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Cre08.g366400 | RAD23B, RAD23 | Ubiquitin receptor RAD23b OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01031048001 | RAD23-3, RAD23C | Ubiquitin receptor RAD23c OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_20110 | RAD23B, RAD23 | shuttle protein (RAD23) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g15360.1 | RAD23-3, RAD23C,... | shuttle protein (RAD23) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g24200.1 | RAD23D, LOC_Os09g24200 | shuttle protein (RAD23) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g26290.1 | RAD23B, RAD23 | shuttle protein (RAD23) | 0.06 | OrthoFinder output from all 47 species | |
Msp_g06770 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g04293 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g43759 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g08630 | RAD23B, RAD23 | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c10_8490V3.1 | RAD23B, RAD23,... | Rad23 UV excision repair protein family | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g11616 | RAD23-3, RAD23C | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g08370 | No alias | ubiquitin-proteasome shuttle factor *(RAD23) & original... | 0.01 | OrthoFinder output from all 47 species | |
Tin_g19292 | RAD23B, RAD23 | ubiquiTin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g30534 | RAD23B, RAD23 | ubiquiTin-proteasome shuttle factor *(RAD23) & original... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003684 | damaged DNA binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006289 | nucleotide-excision repair | IEA | Interproscan |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0002161 | aminoacyl-tRNA editing activity | IEP | HCCA |
MF | GO:0004371 | glycerone kinase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006071 | glycerol metabolic process | IEP | HCCA |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
BP | GO:0019400 | alditol metabolic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
BP | GO:0022406 | membrane docking | IEP | HCCA |
BP | GO:0048278 | vesicle docking | IEP | HCCA |
BP | GO:0051640 | organelle localization | IEP | HCCA |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
BP | GO:0140029 | exocytic process | IEP | HCCA |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
No external refs found! |