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  5. Zm00001e030716_P002

Zm00001e030716_P002 (Zm00001e030716)


Aliases : Zm00001e030716

Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 422.0)


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e030716_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00253900 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g006607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g008962 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g019262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g028830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g040691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g092270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G032000.1 Ceric.17G032000 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Ceric.24G065400.1 Ceric.24G065400 not classified & original description: pacid=50629874... 0.02 OrthoFinder output from all 47 species
Cre17.g707400 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g01553 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009261001 No alias RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
GSVIVT01012514001 HEN4 KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01021523001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os09g32300.1 LOC_Os09g32300 KH domain-containing protein HEN4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g00705 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Lfl_g04023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13999 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ppi_g01057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008079 No alias not classified & original description: CDS=527-2194 0.02 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc03g082980.3.1 Solyc03g082980 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Zm00001e010096_P002 Zm00001e010096 KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 424 489
IPR004088 KH_dom_type_1 188 257
IPR004088 KH_dom_type_1 588 651
No external refs found!